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Sample GSM1359097 Query DataSets for GSM1359097
Status Public on Jun 01, 2014
Title kidney tumor #2
Sample type RNA
 
Source name kidney tumor #2
Organism Mus musculus
Characteristics tissue: kidney
tumor status: tumorous
age: 4M
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol biotin
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description Lin28 derived Wilms tumor biological replicate #2
Data processing The data were normalised using the average background subtracted method
 
Submission date Mar 28, 2014
Last update date Jun 01, 2014
Contact name Achia Urbach
E-mail(s) achia.urbach@childrens.harvard.edu
Phone 617-919-2012
Organization name Children's hospital
Department Hema/Onc
Lab George daley
Street address 1 Blakfan circle
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6885
Series (1)
GSE56323 Lin28 sustains early renal progenitors and induces Wilms tumor

Data table header descriptions
ID_REF
VALUE normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 27.8 0
ILMN_2707227 82.9 0
ILMN_2896528 1118.5 0
ILMN_2721178 351.9 0
ILMN_1227723 175.2 0
ILMN_3033922 573.9 0
ILMN_3092673 2907.5 0
ILMN_2730714 2281.3 0
ILMN_3162224 676 0
ILMN_2816356 36 0
ILMN_2808939 398.3 0
ILMN_2634564 339.7 0
ILMN_1216623 406 0
ILMN_1215157 495.3 0
ILMN_1228777 -4.5 0.80326
ILMN_2737647 -4.6 0.80576
ILMN_1216425 225.7 0
ILMN_2734484 183.9 0
ILMN_2652961 -0.4 0.51754
ILMN_2952292 45.4 0

Total number of rows: 25697

Table truncated, full table size 580 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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