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Sample GSM1359100 Query DataSets for GSM1359100
Status Public on Jun 01, 2014
Title control kidney #3
Sample type RNA
 
Source name control kidney #3
Organism Mus musculus
Characteristics tissue: kidney
tumor status: non-tumorous
age: 4M
Extracted molecule total RNA
Extraction protocol RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment. Quality control was performed with Agilent Bioanalyser.
Label biotin
Label protocol biotin
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description normal kidney biological replicate #3
Data processing The data were normalised using the average background subtracted method
 
Submission date Mar 28, 2014
Last update date Jun 01, 2014
Contact name Achia Urbach
E-mail(s) achia.urbach@childrens.harvard.edu
Phone 617-919-2012
Organization name Children's hospital
Department Hema/Onc
Lab George daley
Street address 1 Blakfan circle
City Boston
State/province MA
ZIP/Postal code 02115
Country USA
 
Platform ID GPL6885
Series (1)
GSE56323 Lin28 sustains early renal progenitors and induces Wilms tumor

Data table header descriptions
ID_REF
VALUE normalized signal intensity
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_1248788 68.3 0
ILMN_2707227 2080.1 0
ILMN_2896528 2719.4 0
ILMN_2721178 717.2 0
ILMN_1227723 289.1 0
ILMN_3033922 1097.2 0
ILMN_3092673 3827.9 0
ILMN_2730714 9924.1 0
ILMN_3162224 773.3 0
ILMN_2816356 25.6 0.00376
ILMN_2808939 490.2 0
ILMN_2634564 350.1 0
ILMN_1216623 348.1 0
ILMN_1215157 456.5 0
ILMN_1228777 3.5 0.19674
ILMN_2737647 8.7 0.06642
ILMN_1216425 5690.7 0
ILMN_2734484 365.5 0
ILMN_2652961 -3.9 0.79198
ILMN_2952292 94.6 0

Total number of rows: 25697

Table truncated, full table size 593 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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