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Sample GSM1360930 Query DataSets for GSM1360930
Status Public on Mar 23, 2015
Title MEF_1
Sample type RNA
 
Source name Somatic cell
Organism Mus musculus
Characteristics vector infection: Day 0
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 5104.342 0
ILMN_2721178 1286.77 0.01754386
ILMN_3033922 1984.414 0.006265664
ILMN_3092673 12043.86 0
ILMN_2816356 87.5783 0.1754386
ILMN_2808939 2411.878 0.002506266
ILMN_2634564 75.65028 0.1817043
ILMN_2737647 -77.01435 0.4335839
ILMN_2734484 -169.6179 0.7681704
ILMN_2952292 -63.40918 0.39599
ILMN_2699078 -193.3284 0.8696742
ILMN_1213681 159.5364 0.141604
ILMN_2735413 68.07875 0.1854637
ILMN_2735415 -92.34706 0.4724311
ILMN_2891688 -68.83601 0.4085213
ILMN_2637698 1801.722 0.007518797
ILMN_2674228 657.7094 0.04385965
ILMN_2601546 122.3682 0.1528822
ILMN_1230831 -137.1369 0.6390978
ILMN_2848071 193.0599 0.1303258

Total number of rows: 25697

Table truncated, full table size 803 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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