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Sample GSM1360931 Query DataSets for GSM1360931
Status Public on Mar 23, 2015
Title MEF_2
Sample type RNA
 
Source name Somatic cell
Organism Mus musculus
Characteristics vector infection: Day 0
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 7996.079 0
ILMN_2721178 1646.453 0.00877193
ILMN_3033922 1392.346 0.0112782
ILMN_3092673 13980.59 0
ILMN_2816356 87.73837 0.1629073
ILMN_2808939 2776.345 0
ILMN_2634564 235.8805 0.1015038
ILMN_2737647 -124.8648 0.6904762
ILMN_2734484 -106.2342 0.6265664
ILMN_2952292 -110.3511 0.641604
ILMN_2699078 -175.586 0.8521304
ILMN_1213681 486.6547 0.04511278
ILMN_2735413 70.11654 0.1754386
ILMN_2735415 35.15273 0.226817
ILMN_2891688 226.5985 0.10401
ILMN_2637698 1238.699 0.01629073
ILMN_2674228 619.7056 0.03634085
ILMN_2601546 36.8201 0.2218045
ILMN_1230831 -115.8751 0.660401
ILMN_2848071 144.8641 0.1365915

Total number of rows: 25697

Table truncated, full table size 804 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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