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Sample GSM1360932 Query DataSets for GSM1360932
Status Public on Mar 23, 2015
Title MEF+KOSM_4d_1
Sample type RNA
 
Source name iPSC intermediate
Organism Mus musculus
Characteristics vector infection: Day 4
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 6777.815 0
ILMN_2721178 3124.501 0.006265664
ILMN_3033922 1404.22 0.02506266
ILMN_3092673 8879.484 0
ILMN_2816356 79.99131 0.1829574
ILMN_2808939 1319.242 0.02882206
ILMN_2634564 232.3575 0.1353384
ILMN_2737647 -164.7115 0.5350877
ILMN_2734484 -202.8555 0.650376
ILMN_2952292 -261.601 0.8471178
ILMN_2699078 -213.1755 0.6992481
ILMN_1213681 545.0642 0.07894737
ILMN_2735413 119.9923 0.1616541
ILMN_2735415 -72.08188 0.3446115
ILMN_2891688 -43.37283 0.3045113
ILMN_2637698 528.1246 0.0802005
ILMN_2674228 949.2937 0.04010025
ILMN_2601546 -11.29231 0.2656642
ILMN_1230831 -266.3812 0.8621554
ILMN_2848071 147.2018 0.1503759

Total number of rows: 25697

Table truncated, full table size 809 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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