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Sample GSM1360934 Query DataSets for GSM1360934
Status Public on Mar 23, 2015
Title MEF+KOSM_8d_1
Sample type RNA
 
Source name iPSC intermediate
Organism Mus musculus
Characteristics vector infection: Day 8
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 9364.04 0
ILMN_2721178 2773.704 0.006265664
ILMN_3033922 1414.153 0.02130326
ILMN_3092673 5181.968 0
ILMN_2816356 -16.25122 0.2706767
ILMN_2808939 1164.846 0.02631579
ILMN_2634564 329.7917 0.1077694
ILMN_2737647 -175.6959 0.6528822
ILMN_2734484 -174.9491 0.650376
ILMN_2952292 -138.1467 0.5238096
ILMN_2699078 -166.3687 0.6240602
ILMN_1213681 762.6073 0.04511278
ILMN_2735413 55.74172 0.1942356
ILMN_2735415 -42.86914 0.3120301
ILMN_2891688 82.25106 0.1741855
ILMN_2637698 580.8311 0.06265664
ILMN_2674228 758.8121 0.04511278
ILMN_2601546 33.02033 0.2155388
ILMN_1230831 -255.035 0.9298246
ILMN_2848071 94.16323 0.1691729

Total number of rows: 25697

Table truncated, full table size 807 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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