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Sample GSM1360936 Query DataSets for GSM1360936
Status Public on Mar 23, 2015
Title MEF+KOSM_19d_1
Sample type RNA
 
Source name iPSC intermediate
Organism Mus musculus
Characteristics vector infection: Day 19
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 6324.849 0
ILMN_2721178 3396.326 0.003759399
ILMN_3033922 1141.058 0.03132832
ILMN_3092673 6779.149 0
ILMN_2816356 66.80957 0.1904762
ILMN_2808939 773.904 0.05388471
ILMN_2634564 131.5227 0.1578947
ILMN_2737647 -228.9843 0.7631579
ILMN_2734484 -220.1825 0.735589
ILMN_2952292 -237.4396 0.7969925
ILMN_2699078 -184.0203 0.5927318
ILMN_1213681 812.3438 0.05137845
ILMN_2735413 86.15412 0.1779449
ILMN_2735415 -60.3022 0.3270677
ILMN_2891688 53.2162 0.1992481
ILMN_2637698 1283.947 0.02631579
ILMN_2674228 703.7449 0.06265664
ILMN_2601546 -25.57734 0.2807018
ILMN_1230831 -268.2531 0.8922306
ILMN_2848071 218.9911 0.1340852

Total number of rows: 25697

Table truncated, full table size 807 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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