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Sample GSM1360937 Query DataSets for GSM1360937
Status Public on Mar 23, 2015
Title MEF+KOSM_19d_2
Sample type RNA
 
Source name iPSC intermediate
Organism Mus musculus
Characteristics vector infection: Day 19
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 7678.161 0
ILMN_2721178 2612.026 0
ILMN_3033922 1574.428 0.00877193
ILMN_3092673 6335.498 0
ILMN_2816356 6.780962 0.235589
ILMN_2808939 777.9923 0.02756892
ILMN_2634564 365.5503 0.0689223
ILMN_2737647 -134.7002 0.7318296
ILMN_2734484 -111.4924 0.6115288
ILMN_2952292 -122.2052 0.6641604
ILMN_2699078 -157.9139 0.8571429
ILMN_1213681 737.0715 0.02882206
ILMN_2735413 45.96961 0.1904762
ILMN_2735415 -50.86449 0.3621554
ILMN_2891688 301.4211 0.0802005
ILMN_2637698 1468.286 0.01002506
ILMN_2674228 620.3254 0.03634085
ILMN_2601546 -68.57281 0.4223058
ILMN_1230831 -150.6203 0.8245614
ILMN_2848071 46.3005 0.1879699

Total number of rows: 25697

Table truncated, full table size 804 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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