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Sample GSM1360939 Query DataSets for GSM1360939
Status Public on Mar 23, 2015
Title MEF+KOSM_33d_2
Sample type RNA
 
Source name iPSC intermediate
Organism Mus musculus
Characteristics vector infection: Day 33
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 6976 0
ILMN_2721178 1837.138 0.006265664
ILMN_3033922 1301.834 0.01253133
ILMN_3092673 5699.871 0
ILMN_2816356 69.84431 0.1691729
ILMN_2808939 930.2386 0.02130326
ILMN_2634564 367.2508 0.06766918
ILMN_2737647 -124.4375 0.7005013
ILMN_2734484 -111.7668 0.6303258
ILMN_2952292 -116.444 0.6478696
ILMN_2699078 -146.2795 0.8170426
ILMN_1213681 616.0056 0.03759398
ILMN_2735413 3.580636 0.2368421
ILMN_2735415 -90.27106 0.5225564
ILMN_2891688 208.4198 0.1115288
ILMN_2637698 1233.094 0.01378446
ILMN_2674228 691.9446 0.02882206
ILMN_2601546 37.57163 0.1904762
ILMN_1230831 -136.7504 0.764411
ILMN_2848071 92.99586 0.1503759

Total number of rows: 25697

Table truncated, full table size 805 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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