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Sample GSM1360940 Query DataSets for GSM1360940
Status Public on Mar 23, 2015
Title Mn/KOSM#24_1
Sample type RNA
 
Source name iPSC
Organism Mus musculus
Characteristics vector infection: none
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 7894.139 0
ILMN_2721178 1715.206 0
ILMN_3033922 1390.456 0.005012531
ILMN_3092673 5707.196 0
ILMN_2816356 79.7206 0.1654135
ILMN_2808939 1094.878 0.01002506
ILMN_2634564 384.0585 0.04887218
ILMN_2737647 -71.09454 0.5075188
ILMN_2734484 27.93877 0.2130326
ILMN_2952292 -24.72471 0.320802
ILMN_2699078 -76.99841 0.5451128
ILMN_1213681 596.2786 0.02882206
ILMN_2735413 8.562926 0.2518797
ILMN_2735415 -38.13347 0.3609022
ILMN_2891688 140.9264 0.1265664
ILMN_2637698 605.0765 0.02756892
ILMN_2674228 1007.761 0.01253133
ILMN_2601546 59.32181 0.1729323
ILMN_1230831 -155.2037 0.9611529
ILMN_2848071 12.59373 0.2393484

Total number of rows: 25697

Table truncated, full table size 798 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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