NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1360941 Query DataSets for GSM1360941
Status Public on Mar 23, 2015
Title Mn/KOSM#24_2
Sample type RNA
 
Source name iPSC
Organism Mus musculus
Characteristics vector infection: none
shield1 addition: none
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 7128.202 0
ILMN_2721178 2205.017 0.002506266
ILMN_3033922 1037.483 0.01879699
ILMN_3092673 5477.612 0
ILMN_2816356 65.10234 0.1779449
ILMN_2808939 1136.525 0.01629073
ILMN_2634564 368.1589 0.0689223
ILMN_2737647 -152.1765 0.8120301
ILMN_2734484 -68.76395 0.4711779
ILMN_2952292 -96.61786 0.5814536
ILMN_2699078 -199.784 0.952381
ILMN_1213681 1090.853 0.01879699
ILMN_2735413 6.560823 0.2481203
ILMN_2735415 4.93807 0.2506266
ILMN_2891688 114.9302 0.1466165
ILMN_2637698 492.9415 0.04887218
ILMN_2674228 1262.483 0.01378446
ILMN_2601546 -30.81603 0.3370927
ILMN_1230831 -69.25318 0.4749373
ILMN_2848071 169.5635 0.1265664

Total number of rows: 25697

Table truncated, full table size 805 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap