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Sample GSM1360942 Query DataSets for GSM1360942
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh100)_22d_1
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 100 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4769.884 0
ILMN_2721178 1441.94 0.006265664
ILMN_3033922 714.6623 0.02506266
ILMN_3092673 5162.891 0
ILMN_2816356 100.1453 0.1378446
ILMN_2808939 1266.072 0.00877193
ILMN_2634564 195.0692 0.1077694
ILMN_2737647 -131.3155 0.8333333
ILMN_2734484 -39.52498 0.3759398
ILMN_2952292 -18.93282 0.3195489
ILMN_2699078 -127.7402 0.8082707
ILMN_1213681 529.3643 0.03634085
ILMN_2735413 53.17631 0.1716792
ILMN_2735415 -9.734283 0.2994987
ILMN_2891688 166.3867 0.1165414
ILMN_2637698 808.7153 0.02255639
ILMN_2674228 771.8885 0.02380952
ILMN_2601546 -23.22567 0.3370927
ILMN_1230831 -127.8977 0.8082707
ILMN_2848071 94.2684 0.141604

Total number of rows: 25697

Table truncated, full table size 799 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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