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Sample GSM1360943 Query DataSets for GSM1360943
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh100)_22d_2
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 100 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 7445.368 0
ILMN_2721178 2059.63 0.006265664
ILMN_3033922 960.5972 0.02130326
ILMN_3092673 6058.705 0
ILMN_2816356 102.1589 0.1528822
ILMN_2808939 1388.057 0.01503759
ILMN_2634564 113.6979 0.141604
ILMN_2737647 -42.58464 0.3446115
ILMN_2734484 80.82569 0.1654135
ILMN_2952292 -71.49498 0.4411027
ILMN_2699078 -129.5672 0.6967419
ILMN_1213681 510.6948 0.04887218
ILMN_2735413 62.46093 0.1754386
ILMN_2735415 -31.88711 0.3220551
ILMN_2891688 451.6634 0.05639098
ILMN_2637698 976.422 0.02130326
ILMN_2674228 985.765 0.02130326
ILMN_2601546 25.68193 0.2067669
ILMN_1230831 -157.5493 0.8032581
ILMN_2848071 154.462 0.1240602

Total number of rows: 25697

Table truncated, full table size 806 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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