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Sample GSM1360944 Query DataSets for GSM1360944
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh30)_22d_1
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 30 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 6056.73 0
ILMN_2721178 1456.668 0.003759399
ILMN_3033922 1042.805 0.01002506
ILMN_3092673 7690.833 0
ILMN_2816356 67.07442 0.1666667
ILMN_2808939 1261.657 0.007518797
ILMN_2634564 371.3133 0.06015038
ILMN_2737647 -81.44164 0.5839599
ILMN_2734484 -102.6945 0.7092732
ILMN_2952292 -3.500679 0.2681704
ILMN_2699078 -108.4153 0.7431078
ILMN_1213681 476.2427 0.03634085
ILMN_2735413 25.81559 0.2042606
ILMN_2735415 -36.113 0.368421
ILMN_2891688 277.2317 0.0764411
ILMN_2637698 636.3779 0.02506266
ILMN_2674228 951.2096 0.01629073
ILMN_2601546 44.4712 0.1817043
ILMN_1230831 -112.3573 0.7719298
ILMN_2848071 41.20198 0.1854637

Total number of rows: 25697

Table truncated, full table size 800 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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