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Sample GSM1360946 Query DataSets for GSM1360946
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh10)_22d_1
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 10 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 5514.885 0
ILMN_2721178 1310.461 0.007518797
ILMN_3033922 1092.994 0.01253133
ILMN_3092673 7546.467 0
ILMN_2816356 81.21311 0.1578947
ILMN_2808939 688.317 0.02506266
ILMN_2634564 118.2036 0.1390978
ILMN_2737647 -114.5748 0.7443609
ILMN_2734484 -24.11205 0.3182957
ILMN_2952292 -86.38387 0.5526316
ILMN_2699078 -116.2952 0.7568922
ILMN_1213681 553.2769 0.03258145
ILMN_2735413 34.80713 0.197995
ILMN_2735415 -21.13796 0.3095238
ILMN_2891688 164.625 0.1203008
ILMN_2637698 1635.986 0.005012531
ILMN_2674228 574.3464 0.03007519
ILMN_2601546 -0.5465834 0.2619048
ILMN_1230831 -150.6108 0.9385965
ILMN_2848071 101.0981 0.1428571

Total number of rows: 25697

Table truncated, full table size 798 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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