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Sample GSM1360947 Query DataSets for GSM1360947
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh10)_22d_2
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 10 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 8640.187 0
ILMN_2721178 3233.66 0
ILMN_3033922 1234.811 0.01253133
ILMN_3092673 8459.028 0
ILMN_2816356 69.07121 0.1641604
ILMN_2808939 1077.416 0.01879699
ILMN_2634564 279.8717 0.0839599
ILMN_2737647 -123.9014 0.7192982
ILMN_2734484 -44.59685 0.3734336
ILMN_2952292 -51.04933 0.3909774
ILMN_2699078 -120.6074 0.7042606
ILMN_1213681 662.9296 0.03258145
ILMN_2735413 -12.24034 0.283208
ILMN_2735415 -77.86257 0.4924812
ILMN_2891688 202.2677 0.1102757
ILMN_2637698 980.2277 0.01879699
ILMN_2674228 878.0923 0.02130326
ILMN_2601546 61.25248 0.1704261
ILMN_1230831 -148.6588 0.8383459
ILMN_2848071 129.8512 0.1390978

Total number of rows: 25697

Table truncated, full table size 806 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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