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Sample GSM1360948 Query DataSets for GSM1360948
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh0)_22d_1
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 0 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 4955.273 0
ILMN_2721178 1492.315 0.01629073
ILMN_3033922 1087.198 0.02380952
ILMN_3092673 5972.532 0
ILMN_2816356 31.35957 0.2155388
ILMN_2808939 1137.177 0.02255639
ILMN_2634564 249.3922 0.112782
ILMN_2737647 -192.3773 0.8446115
ILMN_2734484 -91.36971 0.4649123
ILMN_2952292 -43.84668 0.3533835
ILMN_2699078 -204.5748 0.8884712
ILMN_1213681 419.5725 0.0764411
ILMN_2735413 -14.56572 0.2869674
ILMN_2735415 -90.48428 0.4611529
ILMN_2891688 80.69388 0.1704261
ILMN_2637698 991.9626 0.02380952
ILMN_2674228 535.0851 0.05513784
ILMN_2601546 14.59872 0.2380952
ILMN_1230831 -200.9331 0.8784461
ILMN_2848071 116.4395 0.1541353

Total number of rows: 25697

Table truncated, full table size 805 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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