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Sample GSM1360949 Query DataSets for GSM1360949
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh0)_22d_2
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 22
shield1 addition: 0 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 9303.487 0
ILMN_2721178 3022.879 0.003759399
ILMN_3033922 1375.593 0.02130326
ILMN_3092673 7334.497 0
ILMN_2816356 118.372 0.1842105
ILMN_2808939 685.1865 0.04511278
ILMN_2634564 21.59732 0.2781955
ILMN_2737647 -73.07774 0.4423559
ILMN_2734484 -108.8009 0.5413534
ILMN_2952292 13.25796 0.2907268
ILMN_2699078 -266.2743 0.8671679
ILMN_1213681 427.2134 0.0764411
ILMN_2735413 -49.96722 0.3872181
ILMN_2735415 -134.346 0.5989975
ILMN_2891688 -24.31125 0.3295739
ILMN_2637698 723.849 0.04511278
ILMN_2674228 1050.429 0.02882206
ILMN_2601546 46.43677 0.2443609
ILMN_1230831 -287.0043 0.89599
ILMN_2848071 309.3079 0.1052632

Total number of rows: 25697

Table truncated, full table size 808 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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