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Sample GSM1360950 Query DataSets for GSM1360950
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh0)_79d_1
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 79
shield1 addition: 0 nM
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 7083.582 0
ILMN_2721178 2095.432 0.002506266
ILMN_3033922 1254.149 0.01629073
ILMN_3092673 7940.15 0
ILMN_2816356 50.09036 0.197995
ILMN_2808939 965.3348 0.02380952
ILMN_2634564 372.9589 0.07894737
ILMN_2737647 -231.2836 0.9824561
ILMN_2734484 -133.4786 0.6829574
ILMN_2952292 -93.83451 0.508772
ILMN_2699078 -149.4497 0.7694235
ILMN_1213681 585.7741 0.04135338
ILMN_2735413 9.874329 0.2481203
ILMN_2735415 37.05416 0.2142857
ILMN_2891688 -7.083872 0.2781955
ILMN_2637698 1362.285 0.01378446
ILMN_2674228 672.89 0.03383459
ILMN_2601546 28.452 0.2205514
ILMN_1230831 -223.6786 0.9761904
ILMN_2848071 96.38671 0.1641604

Total number of rows: 25697

Table truncated, full table size 802 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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