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Sample GSM1360952 Query DataSets for GSM1360952
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh0to100_25d)_79d_1
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 79
shield1 addition: 0 to 100 nM at Day 25
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 1
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 6911.907 0
ILMN_2721178 2575.923 0
ILMN_3033922 1049.562 0.00877193
ILMN_3092673 9383.475 0
ILMN_2816356 63.72762 0.1741855
ILMN_2808939 865.0647 0.02130326
ILMN_2634564 483.9975 0.04511278
ILMN_2737647 -119.3551 0.7406015
ILMN_2734484 -24.4954 0.3220551
ILMN_2952292 -19.30974 0.3107769
ILMN_2699078 -114.0224 0.7030075
ILMN_1213681 517.2816 0.04010025
ILMN_2735413 62.63064 0.1754386
ILMN_2735415 29.65905 0.2180451
ILMN_2891688 130.9673 0.1340852
ILMN_2637698 1135.672 0.00877193
ILMN_2674228 898.0625 0.02005013
ILMN_2601546 94.79144 0.1553885
ILMN_1230831 -132.5581 0.8233083
ILMN_2848071 114.7585 0.1466165

Total number of rows: 25697

Table truncated, full table size 802 Kbytes.




Supplementary data files not provided
Raw data are available on Series record
Processed data included within Sample table

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