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Sample GSM1360953 Query DataSets for GSM1360953
Status Public on Mar 23, 2015
Title MEF+fKOSM(Sh0to100_25d)_79d_2
Sample type RNA
 
Source name paused iPSC
Organism Mus musculus
Characteristics vector infection: Day 79
shield1 addition: 0 to 100 nM at Day 25
Extracted molecule total RNA
Extraction protocol Total RNA was purified by ReliaPrep RNA Cell Miniprep System (Promega).
Label Biotin
Label protocol cRNA was prepared by reverse-transcription and labeling using Illumina TotalPrep RNA Amplification Kit (Life Technologies).
 
Hybridization protocol Standard Illumina hybridization protocol
Scan protocol Standard Illumina scanning protocol
Description replicate 2
Data processing The data was normalized using GenomeStudio Gene Expression Module v1.0 and the report was created using GEO Data Submission Report Plug-in v2.0.0
 
Submission date Apr 01, 2014
Last update date Mar 23, 2015
Contact name Ken Nishimura
E-mail(s) ken-nishimura@md.tsukuba.ac.jp
Organization name University of Tsukuba
Street address 1-1-1 Tennodai
City Tsukuba, Ibaraki
ZIP/Postal code 305-8575
Country Japan
 
Platform ID GPL6885
Series (1)
GSE56406 Global gene expression analyses of paused iPSCs

Data table header descriptions
ID_REF
VALUE Average normalized signal
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 8492.576 0
ILMN_2721178 2696.46 0
ILMN_3033922 1963.774 0.003759399
ILMN_3092673 9577.649 0
ILMN_2816356 21.02303 0.2192982
ILMN_2808939 973.7179 0.02005013
ILMN_2634564 345.3237 0.0689223
ILMN_2737647 -37.62565 0.3621554
ILMN_2734484 -95.4741 0.6127819
ILMN_2952292 -17.65387 0.302005
ILMN_2699078 -72.53088 0.5125313
ILMN_1213681 702.0327 0.02506266
ILMN_2735413 -35.45718 0.3571429
ILMN_2735415 -55.17524 0.4348371
ILMN_2891688 112.73 0.1353384
ILMN_2637698 1472.164 0.007518797
ILMN_2674228 1167.923 0.01253133
ILMN_2601546 28.27409 0.2105263
ILMN_1230831 -169.573 0.9135338
ILMN_2848071 51.15853 0.1817043

Total number of rows: 25697

Table truncated, full table size 804 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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