|
|
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Nov 16, 2007 |
Title |
Liver fenofibrate feeding mouse wild type |
Sample type |
RNA |
|
|
Source name |
liver, 7 days 0.2% fenofibrate feeding
|
Organism |
Mus musculus |
Characteristics |
liver from 8 week old male wild-type 129SvEJ mice
|
Extracted molecule |
total RNA |
Label |
standard affymetrix protocol
|
|
|
Description |
Comments: standard format array hybridization with amplification New 20x Euk ctl lot#3004405 exp 111004 DMSO lot # 103K2311 Algorithm: Statistical Corner+ Avg:115, Count:32 Corner- Avg:10337, Count:32 Background Avg:57.41,Stdev:1.91,Max:62.8,Min:54.7 Noise Avg:3.36,Stdev:0.21,Max:4.0,Min:3.0 RawQ 1.81 BF Alpha1 0.05 Alpha2 0.065 Tau 0.015 Gamma1H 0.002 Gamma1L 0.002 Gamma2H 0.002667 Gamma2L 0.002667 Perturbation 1.1 TGT 1000 NF 1 SF 22.8590126 SFGene All
|
Data processing |
standard Affymetrix protocols
|
|
|
Submission date |
Sep 13, 2006 |
Last update date |
Aug 28, 2018 |
Contact name |
David L Silver |
E-mail(s) |
dsilver@aecom.yu.edu
|
Organization name |
Albert Einstein College of Medicine
|
Department |
Biochemistry
|
Lab |
Ullmann 909
|
Street address |
1300 Morris Park Ave.
|
City |
Bronx |
State/province |
NY |
ZIP/Postal code |
10461 |
Country |
USA |
|
|
Platform ID |
GPL1261 |
Series (1) |
GSE5826 |
Liver fenofibrate feeding mouse |
|
Relations |
Reanalyzed by |
GSE119085 |
Data table header descriptions |
ID_REF |
|
VALUE |
signal |
ABS_CALL |
detection, absent or present |
DETECTION P-VALUE |
p-value |
Data table |
ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
AFFX-BioB-5_at |
2240.2 |
P |
0.000754 |
AFFX-BioB-M_at |
4615.1 |
P |
0.000169 |
AFFX-BioB-3_at |
2294 |
P |
0.000095 |
AFFX-BioC-5_at |
6201.2 |
P |
0.00006 |
AFFX-BioC-3_at |
5996.8 |
P |
0.000052 |
AFFX-BioDn-5_at |
5859.7 |
P |
0.000044 |
AFFX-BioDn-3_at |
31717.6 |
P |
0.000044 |
AFFX-CreX-5_at |
73055 |
P |
0.000044 |
AFFX-CreX-3_at |
104621.8 |
P |
0.000044 |
AFFX-DapX-5_at |
39.5 |
A |
0.631562 |
AFFX-DapX-M_at |
209.9 |
A |
0.227636 |
AFFX-DapX-3_at |
93 |
A |
0.749204 |
AFFX-LysX-5_at |
178.2 |
A |
0.5 |
AFFX-LysX-M_at |
45.8 |
A |
0.921998 |
AFFX-LysX-3_at |
133.3 |
A |
0.5 |
AFFX-PheX-5_at |
19.2 |
A |
0.937071 |
AFFX-PheX-M_at |
12.3 |
A |
0.994435 |
AFFX-PheX-3_at |
316.5 |
A |
0.216524 |
AFFX-ThrX-5_at |
128.2 |
A |
0.659339 |
AFFX-ThrX-M_at |
39.6 |
A |
0.904333 |
Total number of rows: 45101
Table truncated, full table size 1231 Kbytes.
Supplementary file |
Size |
Download |
File type/resource |
GSM136099.CEL.gz |
5.8 Mb |
(ftp)(http) |
CEL |
Processed data included within Sample table |
|
|
|
|
|