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GEO accession:
Sample GSM136121
Query DataSets for GSM136121
Status
Public on Sep 16, 2006
Title
Human GM-CSF-macrophages SAGE
Sample type
SAGE
Anchor
NlaIII
Tag Count
57523
Tag Length
10
Source name
GM-CSF-induced macrophages
Organism
Homo sapiens
Characteristics
healthy donor
Extracted molecule
total RNA
Description
SAGE library generated from human monocytes incubated with GM-CSF(500unit/ml) in RPMI 1640 containing 7.5% FCS for 7 days.
Submission date
Sep 14, 2006
Last update date
Nov 19, 2008
Contact name
Shinichi Hashimoto
E-mail(s)
hashimot@m.u-tokyo.ac.jp
Phone
+81-3-5841-3434
Fax
+81-3-5841-3393
Organization name
The University of Tokyo
Department
Graduate School of Medicine
Street address
7-3-1 Hongo, Bunkyo-ku
City
Tokyo
ZIP/Postal code
113-0033
Country
Japan
Platform ID
GPL4
Series (1)
GSE5833
Human Leukocytes SAGE
Data table header descriptions
TAG
Ten base SAGE tag
COUNT
Absolute tag count
TPM
tags per million
Data table
TAG
COUNT
TPM
CCCTGGGTTC
1548
26910.97
TGGCCCCAGG
1528
26563.29
TTGGGGTTTC
1063
18479.56
CGACCCCACG
1053
18305.72
CCCATCGTCC
437
7596.96
CTAAGACTTC
354
6154.06
TGGGTGAGCC
348
6049.75
ACTTTTTCAA
342
5945.45
GGGGCAACAG
336
5841.14
GCGGTTGTGG
302
5250.07
GTTCACATTA
299
5197.92
GTATGGGCCC
291
5058.85
TTGGTCCTCT
276
4798.08
GTTGTGGTTA
270
4693.77
CCTGTAATCC
253
4398.24
GAAATACAGT
249
4328.70
GGGGAAATCG
249
4328.70
TTCATACACC
235
4085.32
TGTGTTGAGA
234
4067.94
CTGACCTGTG
220
3824.56
Total number of rows:
15880
Table truncated, full table size
296 Kbytes
.
Supplementary data files not provided
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