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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 01, 2007 |
| Title |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9128 |
| Sample type |
RNA |
| |
|
| Source name |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9128
|
| Organism |
Mus musculus |
| Characteristics |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)
|
| Extracted molecule |
total RNA |
| Label |
biotin
|
| |
|
| Description |
Laser captured cecal epithelium from GF NMRI adult mice on a standard polysaccharide-rich diet
|
| Data processing |
MAS5; scaling = 500
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| |
|
| Submission date |
Sep 14, 2006 |
| Last update date |
Sep 19, 2006 |
| Contact name |
Justin L. Sonnenburg |
| E-mail(s) |
jsonnenburg@wustl.edu
|
| Phone |
314-362-5443
|
| URL |
http://gordonlab.wustl.edu/metaview/bt
|
| Organization name |
Washington University
|
| Department |
Center for Genome Sciences
|
| Lab |
Jeffrey I. Gordon
|
| Street address |
4444 Forest Park
|
| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63108 |
| Country |
USA |
| |
|
| Platform ID |
GPL1261 |
| Series (1) |
| GSE5870 |
Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI |
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| Data table header descriptions |
| ID_REF |
|
| VALUE |
MAS5-calculated Signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| 1415670_at |
1443.5 |
P |
0.023926 |
| 1415671_at |
3739.7 |
P |
0.000244 |
| 1415672_at |
9148 |
P |
0.000732 |
| 1415673_at |
2069.6 |
P |
0.046143 |
| 1415675_at |
1491.3 |
A |
0.095215 |
| 1415677_at |
2302.4 |
P |
0.001953 |
| 1415678_at |
32020.6 |
P |
0.001953 |
| 1415679_at |
25425.5 |
P |
0.000244 |
| 1415680_at |
1866.5 |
A |
0.095215 |
| 1415681_at |
13272.1 |
P |
0.000244 |
| 1415682_at |
62.4 |
A |
0.696289 |
| 1415683_at |
25763 |
P |
0.001221 |
| 1415684_at |
865.1 |
A |
0.171387 |
| 1415685_at |
493.4 |
A |
0.432373 |
| 1415686_at |
1890 |
A |
0.149658 |
| 1415688_at |
11475.8 |
P |
0.000244 |
| 1415690_at |
15383 |
P |
0.000732 |
| 1415691_at |
8602.1 |
P |
0.000244 |
| 1415693_at |
1523.1 |
P |
0.046143 |
| 1415694_at |
507 |
A |
0.303711 |
Total number of rows: 45101
Table truncated, full table size 1240 Kbytes.
| Supplementary data files not provided |
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