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| Status |
Public on Jan 01, 2007 |
| Title |
B. thetatiotaomicron mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)_#9130 |
| Sample type |
RNA |
| |
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| Source name |
B. thetatiotaomicron mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)
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| Organism |
Mus musculus |
| Characteristics |
B. thetatiotaomicron mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)
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| Extracted molecule |
total RNA |
| Label |
biotin
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| |
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| Description |
Laser captured cecal epithelium from B. thetatiotaomicron mono-associated (10d) NMRI adult mice on a standard polysaccharide-rich diet
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| Data processing |
MAS5; scaling = 500
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| Submission date |
Sep 15, 2006 |
| Last update date |
Sep 19, 2006 |
| Contact name |
Justin L. Sonnenburg |
| E-mail(s) |
jsonnenburg@wustl.edu
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| Phone |
314-362-5443
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| URL |
http://gordonlab.wustl.edu/metaview/bt
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| Organization name |
Washington University
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| Department |
Center for Genome Sciences
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| Lab |
Jeffrey I. Gordon
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| Street address |
4444 Forest Park
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| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63108 |
| Country |
USA |
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| Platform ID |
GPL1261 |
| Series (1) |
| GSE5870 |
Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI |
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| Data table header descriptions |
| ID_REF |
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| VALUE |
MAS5-calculated Signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| 1415670_at |
2262.4 |
P |
0.046143 |
| 1415671_at |
3780.6 |
P |
0.000732 |
| 1415672_at |
14365 |
P |
0.001221 |
| 1415673_at |
1283.9 |
A |
0.246094 |
| 1415675_at |
2450.1 |
M |
0.056152 |
| 1415677_at |
1317.6 |
A |
0.334473 |
| 1415678_at |
34666.1 |
P |
0.00415 |
| 1415679_at |
31763.3 |
P |
0.001953 |
| 1415680_at |
3666.7 |
P |
0.030273 |
| 1415681_at |
14307.2 |
P |
0.000244 |
| 1415682_at |
744.2 |
A |
0.246094 |
| 1415683_at |
25469.1 |
P |
0.001953 |
| 1415684_at |
768.9 |
A |
0.067627 |
| 1415685_at |
1269.7 |
P |
0.001953 |
| 1415686_at |
2314.7 |
A |
0.095215 |
| 1415688_at |
10484.8 |
P |
0.000732 |
| 1415690_at |
16660.8 |
P |
0.000244 |
| 1415691_at |
6410.3 |
P |
0.000244 |
| 1415693_at |
3942.2 |
A |
0.067627 |
| 1415694_at |
55.3 |
A |
0.72583 |
Total number of rows: 45101
Table truncated, full table size 1240 Kbytes.
| Supplementary data files not provided |
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