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GEO help: Mouse over screen elements for information. |
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| Status |
Public on Jan 01, 2007 |
| Title |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9175 |
| Sample type |
RNA |
| |
|
| Source name |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9175
|
| Organism |
Mus musculus |
| Characteristics |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)
|
| Extracted molecule |
total RNA |
| Label |
biotin
|
| |
|
| Description |
Laser captured cecal epithelium from GF NMRI adult mice on a standard polysaccharide-rich diet
|
| Data processing |
MAS5; scaling = 500
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|
| Submission date |
Sep 15, 2006 |
| Last update date |
Sep 19, 2006 |
| Contact name |
Justin L. Sonnenburg |
| E-mail(s) |
jsonnenburg@wustl.edu
|
| Phone |
314-362-5443
|
| URL |
http://gordonlab.wustl.edu/metaview/bt
|
| Organization name |
Washington University
|
| Department |
Center for Genome Sciences
|
| Lab |
Jeffrey I. Gordon
|
| Street address |
4444 Forest Park
|
| City |
Saint Louis |
| State/province |
MO |
| ZIP/Postal code |
63108 |
| Country |
USA |
| |
|
| Platform ID |
GPL1981 |
| Series (1) |
| GSE5870 |
Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI |
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| Data table header descriptions |
| ID_REF |
|
| VALUE |
MAS5-calculated Signal intensity |
| ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
| DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
| Data table |
| ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
| 32094_at |
3720.7 |
P |
0.043968 |
| 35179_at |
2049.9 |
A |
0.438361 |
| 35626_at |
770.2 |
A |
0.5 |
| 36936_at |
2736.9 |
A |
0.234557 |
| 37408_at |
4171.5 |
A |
0.189687 |
| 38521_at |
2982 |
A |
0.458816 |
| 53076_at |
1730.6 |
A |
0.339558 |
| 91703_at |
426.9 |
A |
0.765443 |
| 91920_at |
3895.7 |
P |
0.031336 |
| 1405_i_at |
174 |
A |
0.945289 |
| 200004_at |
10517.7 |
P |
0.00415 |
| 200010_at |
253.9 |
A |
0.753906 |
| 200017_at |
1889 |
A |
0.366211 |
| 200024_at |
2295.1 |
A |
0.5 |
| 200026_at |
9189.9 |
P |
0.008057 |
| 200046_at |
2472.5 |
A |
0.219482 |
| 200642_at |
2069.7 |
A |
0.171387 |
| 200643_at |
541.3 |
A |
0.828613 |
| 200651_at |
5559.3 |
P |
0.00415 |
| 200661_at |
150.3 |
A |
0.98584 |
Total number of rows: 1814
Table truncated, full table size 51 Kbytes.
| Supplementary data files not provided |
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