|
|
GEO help: Mouse over screen elements for information. |
|
Status |
Public on Jan 01, 2007 |
Title |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9176 |
Sample type |
RNA |
|
|
Source name |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)_#9176
|
Organism |
Mus musculus |
Characteristics |
GF NMRI mice LCM cecal epithelium (pool of 4 animals)
|
Extracted molecule |
total RNA |
Label |
biotin
|
|
|
Description |
Laser captured cecal epithelium from GF NMRI adult mice on a standard polysaccharide-rich diet
|
Data processing |
MAS5; scaling = 500
|
|
|
Submission date |
Sep 15, 2006 |
Last update date |
Sep 19, 2006 |
Contact name |
Justin L. Sonnenburg |
E-mail(s) |
jsonnenburg@wustl.edu
|
Phone |
314-362-5443
|
URL |
http://gordonlab.wustl.edu/metaview/bt
|
Organization name |
Washington University
|
Department |
Center for Genome Sciences
|
Lab |
Jeffrey I. Gordon
|
Street address |
4444 Forest Park
|
City |
Saint Louis |
State/province |
MO |
ZIP/Postal code |
63108 |
Country |
USA |
|
|
Platform ID |
GPL1981 |
Series (1) |
GSE5870 |
Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI |
|
Data table header descriptions |
ID_REF |
|
VALUE |
MAS5-calculated Signal intensity |
ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
Data table |
ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
32094_at |
2950.2 |
A |
0.081337 |
35179_at |
2190.5 |
A |
0.32083 |
35626_at |
139.4 |
A |
0.64131 |
36936_at |
1062.6 |
A |
0.358668 |
37408_at |
3096 |
A |
0.302547 |
38521_at |
3231.9 |
A |
0.138765 |
53076_at |
1017.1 |
A |
0.697453 |
91703_at |
1266.6 |
A |
0.781017 |
91920_at |
5503.8 |
A |
0.081337 |
1405_i_at |
185 |
A |
0.889551 |
200004_at |
33166 |
P |
0.001953 |
200010_at |
407.3 |
A |
0.665527 |
200017_at |
1191.6 |
A |
0.27417 |
200024_at |
196.5 |
A |
0.633789 |
200026_at |
10968 |
P |
0.010742 |
200046_at |
2979 |
P |
0.030273 |
200642_at |
187.4 |
A |
0.533936 |
200643_at |
1492.2 |
A |
0.5 |
200651_at |
3239.8 |
P |
0.000732 |
200661_at |
721.5 |
A |
0.828613 |
Total number of rows: 1814
Table truncated, full table size 51 Kbytes.
Supplementary data files not provided |
|
|
|
|
|