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Status |
Public on Jan 01, 2007 |
Title |
B. longum mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)_#9182 |
Sample type |
RNA |
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Source name |
B. longum mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)
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Organism |
Mus musculus |
Characteristics |
B. longum mono-associated (10d) gnotobiotic NMRI mice LCM cecal epithelium (pool of 4 animals)
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Extracted molecule |
total RNA |
Label |
biotin
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Description |
Laser captured cecal epithelium from B. longum mono-associated (10d) NMRI adult mice on a standard polysaccharide-rich diet
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Data processing |
MAS5; scaling = 500
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Submission date |
Sep 15, 2006 |
Last update date |
Sep 19, 2006 |
Contact name |
Justin L. Sonnenburg |
E-mail(s) |
jsonnenburg@wustl.edu
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Phone |
314-362-5443
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URL |
http://gordonlab.wustl.edu/metaview/bt
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Organization name |
Washington University
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Department |
Center for Genome Sciences
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Lab |
Jeffrey I. Gordon
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Street address |
4444 Forest Park
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City |
Saint Louis |
State/province |
MO |
ZIP/Postal code |
63108 |
Country |
USA |
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Platform ID |
GPL1981 |
Series (1) |
GSE5870 |
Gnotobiotic mouse cecal epithelium; B.thetaiotaomicron-B. longum mono- versus bi-association, PR chow, NMRI |
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Data table header descriptions |
ID_REF |
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VALUE |
MAS5-calculated Signal intensity |
ABS_CALL |
the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC) |
DETECTION P-VALUE |
'detection p-value', p-value that indicates the significance level of the detection call |
Data table |
ID_REF |
VALUE |
ABS_CALL |
DETECTION P-VALUE |
200046_at |
2510.5 |
A |
0.111572 |
200642_at |
2606.5 |
A |
0.303711 |
200643_at |
145.9 |
A |
0.953857 |
200651_at |
4586 |
A |
0.080566 |
200661_at |
460.4 |
A |
0.828613 |
200697_at |
224.9 |
A |
0.888428 |
200814_at |
653.5 |
A |
0.753906 |
200821_at |
118.1 |
A |
0.850342 |
200869_at |
1821.2 |
A |
0.067627 |
200872_at |
8672.8 |
A |
0.080566 |
200916_at |
309.8 |
A |
0.962402 |
200923_at |
556.7 |
A |
0.850342 |
200936_at |
2143.6 |
A |
0.171387 |
200962_at |
2359.8 |
A |
0.303711 |
201011_at |
434.7 |
A |
0.932373 |
201105_at |
977.6 |
A |
0.828613 |
201234_at |
677.9 |
A |
0.567627 |
201389_at |
260.2 |
A |
0.72583 |
201400_at |
3580.6 |
A |
0.27417 |
201473_at |
214.2 |
A |
0.780518 |
Total number of rows: 1799
Table truncated, full table size 51 Kbytes.
Supplementary data files not provided |
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