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Sample GSM1370769 Query DataSets for GSM1370769
Status Public on May 01, 2015
Title 211At_liver_1.7kBq_1h_#2
Sample type RNA
 
Source name Mouse liver, 1.7 kBq, 1h
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: liver
injected activity: 1.7 kBq
time point: 1h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) britta.langen@gu.se
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1490.65 0
ILMN_2721178 475.9672 0
ILMN_3033922 528.1788 0
ILMN_3092673 3088.798 0
ILMN_2816356 104.6047 0.6002506
ILMN_2808939 1447.486 0
ILMN_2634564 524.3852 0
ILMN_2737647 113.5568 0.1854637
ILMN_2734484 848.8248 0
ILMN_2952292 170.8627 0
ILMN_2699078 109.4929 0.3195489
ILMN_1213681 227.3526 0
ILMN_2735413 345.3257 0
ILMN_2735415 363.1543 0
ILMN_2891688 741.9348 0
ILMN_2637698 490.4266 0
ILMN_2674228 174.924 0
ILMN_2601546 126.2222 0.05388471
ILMN_1230831 109.2583 0.3295739
ILMN_2848071 890.6842 0

Total number of rows: 25697

Table truncated, full table size 731 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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