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Sample GSM1370797 Query DataSets for GSM1370797
Status Public on May 01, 2015
Title 211At_lung_0kBq_#1
Sample type RNA
 
Source name Mouse lung, 0 kBq
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: lung
injected activity: 0 kBq
time point: 24h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) britta.langen@gu.se
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1483.745 0
ILMN_2721178 357.6315 0
ILMN_3033922 404.7769 0
ILMN_3092673 3038.182 0
ILMN_2816356 107.0568 0.3057644
ILMN_2808939 379.9833 0
ILMN_2634564 375.4403 0
ILMN_2737647 135.7224 0
ILMN_2734484 429.4723 0
ILMN_2952292 127.8404 0.002506266
ILMN_2699078 113.9767 0.05137845
ILMN_1213681 194.7353 0
ILMN_2735413 96.53435 0.9674186
ILMN_2735415 108.541 0.2192982
ILMN_2891688 590.2248 0
ILMN_2637698 1034.693 0
ILMN_2674228 191.1302 0
ILMN_2601546 111.7433 0.09022556
ILMN_1230831 112.8038 0.06641604
ILMN_2848071 109.4058 0.1729323

Total number of rows: 25697

Table truncated, full table size 719 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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