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Sample GSM1370800 Query DataSets for GSM1370800
Status Public on May 01, 2015
Title 211At_medulla_1.7kBq_1h_#1
Sample type RNA
 
Source name Mouse kidney medulla, 1.7 kBq, 1h
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: kidney medulla
injected activity: 1.7 kBq
time point: 1h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) britta.langen@gu.se
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1762.424 0
ILMN_2721178 360.837 0
ILMN_3033922 771.9302 0
ILMN_3092673 3948.639 0
ILMN_2816356 107.202 0.3521303
ILMN_2808939 325.1087 0
ILMN_2634564 312.0668 0
ILMN_2737647 110.449 0.2017544
ILMN_2734484 1019.153 0
ILMN_2952292 141.9697 0.003759399
ILMN_2699078 103.2383 0.6629072
ILMN_1213681 205.9189 0.001253133
ILMN_2735413 186.4982 0.001253133
ILMN_2735415 189.7535 0.001253133
ILMN_2891688 895.1505 0
ILMN_2637698 630.7714 0
ILMN_2674228 171.3319 0.001253133
ILMN_2601546 112.4319 0.1328321
ILMN_1230831 117.4821 0.05639098
ILMN_2848071 313.758 0

Total number of rows: 25697

Table truncated, full table size 753 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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