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Sample GSM1370816 Query DataSets for GSM1370816
Status Public on May 01, 2015
Title 211At_spleen_1.7kBq_1h_#1
Sample type RNA
 
Source name Mouse spleen, 1.7 kBq, 1h
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: spleen
injected activity: 1.7 kBq
time point: 1h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) britta.langen@gu.se
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1621.02 0
ILMN_2721178 339.9713 0
ILMN_3033922 320.6454 0
ILMN_3092673 2265.19 0
ILMN_2816356 127.4729 0.007518797
ILMN_2808939 485.4976 0
ILMN_2634564 319.4304 0
ILMN_2737647 113.7885 0.09398496
ILMN_2734484 287.3816 0
ILMN_2952292 131.0443 0.006265664
ILMN_2699078 114.8874 0.07894737
ILMN_1213681 198.7567 0.001253133
ILMN_2735413 103.8689 0.5714286
ILMN_2735415 99.3576 0.8897243
ILMN_2891688 1231.337 0
ILMN_2637698 998.5741 0
ILMN_2674228 229.0115 0
ILMN_2601546 108.1065 0.3082707
ILMN_1230831 108.0305 0.3157895
ILMN_2848071 111.3431 0.1716792

Total number of rows: 25697

Table truncated, full table size 751 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

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