NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Sample GSM1370830 Query DataSets for GSM1370830
Status Public on May 01, 2015
Title 211At_spleen_0kBq_#2
Sample type RNA
 
Source name Mouse spleen, 0 kBq
Organism Mus musculus
Characteristics strain: Balb/c
gender: female
tissue: spleen
injected activity: 0 kBq
time point: 24h
nuclide: 211-astatine
Treatment protocol Excised organs were flash-frozen in liquid nitrogen and stored at -80°C until RNA extraction.
Extracted molecule total RNA
Extraction protocol Total RNA was extracted with RNeasy Lipid Tissue Mini Kit according to the manufacturer’s instructions. Quality control was performed with Agilent Bioanalyzer.
Label biotin
Label protocol Illumina®Totalprep-96RNA Amplification kit 4397949 RevC, (Modification of Amplification kit v 2.2)
 
Hybridization protocol WGGEX_Direct_Hybridization_Assay_EUC_11322187_A
Scan protocol Standard Illumina iScan N240 scanning protocol with scan setting file = Direct Hyb
Data processing The data were normalized using quantile normalization with BASE
 
Submission date Apr 17, 2014
Last update date May 01, 2015
Contact name Britta Langen
E-mail(s) britta.langen@gu.se
Organization name Sahlgrenska Academy at University of Gothenburg
Department Department of Radiation Physics
Street address Gula stråket 2B
City Gothenburg
ZIP/Postal code SE-413 45
Country Sweden
 
Platform ID GPL6885
Series (1)
GSE56894 Transcriptional response in normal tissues in mice after 211At administration - dependency of absorbed dose, dose-rate and time

Data table header descriptions
ID_REF
VALUE quantile normalized
Detection Pval

Data table
ID_REF VALUE Detection Pval
ILMN_2896528 1354.577 0
ILMN_2721178 345.5025 0
ILMN_3033922 388.0646 0
ILMN_3092673 1869.851 0
ILMN_2816356 125.5614 0.01253133
ILMN_2808939 553.2115 0
ILMN_2634564 394.0343 0
ILMN_2737647 100.2402 0.8609022
ILMN_2734484 306.2509 0
ILMN_2952292 130.3921 0.007518797
ILMN_2699078 114.8616 0.0877193
ILMN_1213681 185.983 0.001253133
ILMN_2735413 103.7828 0.6303258
ILMN_2735415 100.929 0.8220552
ILMN_2891688 913.7073 0
ILMN_2637698 794.7299 0
ILMN_2674228 213.1877 0
ILMN_2601546 110.6917 0.1892231
ILMN_1230831 99.17873 0.9122807
ILMN_2848071 120.0438 0.03007519

Total number of rows: 25697

Table truncated, full table size 754 Kbytes.




Supplementary data files not provided
Processed data included within Sample table

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap