|
Status |
Public on Nov 01, 2014 |
Title |
4B Tg/+ 9753 |
Sample type |
RNA |
|
|
Source name |
4B Tg/+ 9753
|
Organism |
Mus musculus |
Characteristics |
strain: B6C3F1/J genotype/variation: Tg treatment: 4B tissue: gastrocnemius skeletal muscle
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA from gastrocnemius skeletal muscle was extracted using RNAeasy mini kit (Qiagen) with DNase I treatment to eliminate genomic DNA contamination
|
Label |
biotin
|
Label protocol |
Standard Illumina biotin-labeling protocol
|
|
|
Hybridization protocol |
Samples were hybridized onto the Illumina Sentrix BeadChip Array MouseRef-8 v2 for 18 hours at 58°C (protocol available at http://www.illumina.com/products/mouseref-8_expression_beadchip_kits_v2.ilmn).
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
4B_Tg_9753
|
Data processing |
The data were normalized using quantile normalization with IlluminaGUI in R
|
|
|
Submission date |
Apr 22, 2014 |
Last update date |
Nov 01, 2014 |
Contact name |
Giovanni Coppola |
E-mail(s) |
gcoppola@ucla.edu
|
Phone |
310-794-4172
|
Organization name |
UCLA
|
Department |
Psychiatry and Neurology
|
Lab |
Neurogenetics
|
Street address |
1524 Gonda, 695 Charles Young Drive South
|
City |
Los Angeles |
State/province |
CA |
ZIP/Postal code |
90095 |
Country |
USA |
|
|
Platform ID |
GPL6885 |
Series (1) |
GSE56963 |
The effect of HDAC inhibitor, 4b, on skeletal muscle gene expression |
|