|
Status |
Public on Aug 20, 2014 |
Title |
sorted spleenic WT CD4+ T cells rep2 |
Sample type |
RNA |
|
|
Source name |
WT CD4+ (CD45.1) T cells
|
Organism |
Mus musculus |
Characteristics |
strain: B6 mixed bone marrow chimera age: 12 months tissue: spleen cell type: WT CD4+ T cells
|
Extracted molecule |
total RNA |
Extraction protocol |
RNA was extracted with Trizol reagent, followed by clean-up and DNase I treatment with QIAGEN RNeasy mini kit in accordance with the prescribed protocol provided with the kit. Quality control was performed with Agilent Bioanalyser.
|
Label |
biotin
|
Label protocol |
Biotinylated cRNA were prepared with the Ambion MessageAmp kit for Illumina arrays
|
|
|
Hybridization protocol |
Standard Illumina hybridization protocol
|
Scan protocol |
Standard Illumina scanning protocol
|
Description |
WT sample2
|
Data processing |
The data were normalised using quantile normalization with IlluminaGUI in R
|
|
|
Submission date |
May 16, 2014 |
Last update date |
Aug 20, 2014 |
Contact name |
Bernardo Reis |
E-mail(s) |
breis@rockefeller.edu
|
Organization name |
Rockefeller University
|
Street address |
1234 York Avenue
|
City |
New York |
State/province |
NY |
ZIP/Postal code |
10065 |
Country |
USA |
|
|
Platform ID |
GPL6885 |
Series (1) |
GSE57738 |
T cell-intrinsic MyD88 signaling in cognate immune response to intracellular parasite infection: crucial role for IL-18R |
|