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Sample GSM139079 Query DataSets for GSM139079
Status Public on Oct 24, 2006
Title Polysome_minus
Sample type RNA
 
Source name total RNA
Organism Mus musculus
Characteristics sample isolated from polysomal RNA of unstimulated B cells
Extracted molecule total RNA
Label Biotin
 
Description Polysomal RNA was isolated from unstimulated B cells as described (Patke et. al., 2006).
Data processing Affymetrix GeneChip Operating Software v 1.4
 
Submission date Oct 06, 2006
Last update date Aug 28, 2018
Contact name Alina Patke
Organization name Rockefeller University
Street address 1230 York Avenue
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL1261
Series (1)
GSE5985 Gene expression profile of BAFF-stimulated B cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 485.2 P 0.000662
AFFX-BioB-M_at 747.7 P 0.00007
AFFX-BioB-3_at 434.8 P 0.000195
AFFX-BioC-5_at 1500.5 P 0.000081
AFFX-BioC-3_at 1765.6 P 0.000044
AFFX-BioDn-5_at 2687.5 P 0.000052
AFFX-BioDn-3_at 7062.6 P 0.00011
AFFX-CreX-5_at 19103 P 0.000052
AFFX-CreX-3_at 20470.1 P 0.000044
AFFX-DapX-5_at 18.1 A 0.287743
AFFX-DapX-M_at 10.5 A 0.559354
AFFX-DapX-3_at 30.2 A 0.814869
AFFX-LysX-5_at 2.2 A 0.631562
AFFX-LysX-M_at 10.7 A 0.843268
AFFX-LysX-3_at 30.5 M 0.050229
AFFX-PheX-5_at 2.1 A 0.99156
AFFX-PheX-M_at 3 A 0.868639
AFFX-PheX-3_at 23.1 A 0.686277
AFFX-ThrX-5_at 39.9 A 0.250796
AFFX-ThrX-M_at 25.3 A 0.41138

Total number of rows: 45101

Table truncated, full table size 1215 Kbytes.




Supplementary file Size Download File type/resource
GSM139079.CEL.gz 6.3 Mb (ftp)(http) CEL
GSM139079.EXP.gz 360 b (ftp)(http) EXP
Raw data provided as supplementary file

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