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Sample GSM139087 Query DataSets for GSM139087
Status Public on Oct 24, 2006
Title Total_minus
Sample type RNA
 
Source name total RNA
Organism Mus musculus
Characteristics total RNA isolated from unstimulated B cells
Extracted molecule total RNA
Label Biotin
 
Description Total RNA was isolated from unstimulated B cells as described (Patke et. al., 2006).
Data processing Affymetrix GeneChip Operating Software v 1.4
 
Submission date Oct 06, 2006
Last update date Aug 28, 2018
Contact name Alina Patke
Organization name Rockefeller University
Street address 1230 York Avenue
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL1261
Series (1)
GSE5985 Gene expression profile of BAFF-stimulated B cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 449.1 P 0.000509
AFFX-BioB-M_at 685.4 P 0.00006
AFFX-BioB-3_at 402.1 P 0.000147
AFFX-BioC-5_at 1350.9 P 0.000081
AFFX-BioC-3_at 1742.3 P 0.000044
AFFX-BioDn-5_at 2469.3 P 0.000052
AFFX-BioDn-3_at 6431 P 0.000147
AFFX-CreX-5_at 15816.4 P 0.000052
AFFX-CreX-3_at 17862 P 0.000044
AFFX-DapX-5_at 38.6 A 0.067678
AFFX-DapX-M_at 39.3 A 0.250796
AFFX-DapX-3_at 9.2 A 0.772364
AFFX-LysX-5_at 4.8 A 0.559354
AFFX-LysX-M_at 8.1 A 0.852061
AFFX-LysX-3_at 23.6 A 0.156732
AFFX-PheX-5_at 2.2 A 0.9273
AFFX-PheX-M_at 4.7 A 0.910522
AFFX-PheX-3_at 56.7 A 0.52976
AFFX-ThrX-5_at 33.9 A 0.5
AFFX-ThrX-M_at 14 A 0.631562

Total number of rows: 45101

Table truncated, full table size 1215 Kbytes.




Supplementary file Size Download File type/resource
GSM139087.CEL.gz 6.4 Mb (ftp)(http) CEL
GSM139087.EXP.gz 367 b (ftp)(http) EXP
Raw data provided as supplementary file

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