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Sample GSM139091 Query DataSets for GSM139091
Status Public on Oct 24, 2006
Title Total_plus
Sample type RNA
 
Source name total RNA
Organism Mus musculus
Characteristics Total RNA isolated from B cells which had been stimulated with BAFF for 36 hours
Extracted molecule total RNA
Label Biotin
 
Description Total RNA was isolated from B cells, which had been stimulated with BAFF for 36 hours, as described (Patke et. al., 2006).
Data processing Affymetrix GeneChip Operating Software v 1.4
 
Submission date Oct 06, 2006
Last update date Aug 28, 2018
Contact name Alina Patke
Organization name Rockefeller University
Street address 1230 York Avenue
City New York
State/province NY
ZIP/Postal code 10021
Country USA
 
Platform ID GPL1261
Series (1)
GSE5985 Gene expression profile of BAFF-stimulated B cells
Relations
Reanalyzed by GSE119085

Data table header descriptions
ID_REF
VALUE signal
ABS_CALL the call in an absolute analysis that indicates if the transcript was present (P), absent (A), marginal (M), or no call (NC)
DETECTION P-VALUE 'detection p-value', p-value that indicates the significance level of the detection call

Data table
ID_REF VALUE ABS_CALL DETECTION P-VALUE
AFFX-BioB-5_at 496.8 P 0.000509
AFFX-BioB-M_at 706.5 P 0.00006
AFFX-BioB-3_at 369.4 P 0.000095
AFFX-BioC-5_at 1327 P 0.00007
AFFX-BioC-3_at 1728.8 P 0.000044
AFFX-BioDn-5_at 2321.3 P 0.000052
AFFX-BioDn-3_at 7231.4 P 0.00011
AFFX-CreX-5_at 16341.5 P 0.000052
AFFX-CreX-3_at 18463.4 P 0.000044
AFFX-DapX-5_at 28.8 A 0.165861
AFFX-DapX-M_at 32.8 A 0.340648
AFFX-DapX-3_at 8.7 A 0.724854
AFFX-LysX-5_at 16.5 A 0.440646
AFFX-LysX-M_at 7.5 A 0.897835
AFFX-LysX-3_at 24.9 A 0.216524
AFFX-PheX-5_at 1.8 A 0.949771
AFFX-PheX-M_at 1.6 A 0.897835
AFFX-PheX-3_at 26.6 A 0.631562
AFFX-ThrX-5_at 27.4 A 0.52976
AFFX-ThrX-M_at 14.3 A 0.368438

Total number of rows: 45101

Table truncated, full table size 1213 Kbytes.




Supplementary file Size Download File type/resource
GSM139091.CEL.gz 6.4 Mb (ftp)(http) CEL
GSM139091.EXP.gz 367 b (ftp)(http) EXP
Raw data provided as supplementary file

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