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GEO accession:
Sample GSM139119
Query DataSets for GSM139119
Status
Public on Apr 09, 2007
Title
Normal_Ovary_1041N
Sample type
RNA
Source name
Normal_Ovary
Organism
Mus musculus
Characteristics
Strain: C57BL6/J (with Apc loxP/loxP and Pten loxP/loxP)
Gender: Female
Extracted molecule
total RNA
Extraction protocol
Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
Label
biotin
Label protocol
3-5 µg of total RNA was processed to produce biotinylated cRNA targets.
Hybridization protocol
standard Affymetrix procedures
Scan protocol
standard Affymetrix procedures
Description
Tissue: Normal ovary
Data processing
Ann Arbor quantile-normalized trimmed-mean method
Submission date
Oct 06, 2006
Last update date
Aug 28, 2018
Contact name
Rork Kuick
E-mail(s)
rork@umich.edu
Phone
734-936-9241
Organization name
University of Michigan
Street address
University of Michigan, SPH II, 1415 Washington Heights, Room M2533
City
Ann Arbor
State/province
MI
ZIP/Postal code
48109-2029
Country
USA
Platform ID
GPL1261
Series (1)
GSE5987
Mouse model of Endometrioid Ovarian Adenocarcinomas by conditional inactivation of PTEN and APC genes
Relations
Reanalyzed by
GSE119085
Data table header descriptions
ID_REF
VALUE
quantile-normalized trimmed-mean, log-transformed with log(max(x+50,0)+50) using base 10 logarithms
Data table
ID_REF
VALUE
1415670_at
3.574494268
1415671_at
3.655234507
1415672_at
3.89203892
1415673_at
2.771587481
1415674_a_at
3.28510703
1415675_at
3.340047318
1415676_a_at
3.902438056
1415677_at
2.903089987
1415678_at
3.654369091
1415679_at
3.932575223
1415680_at
3.497206181
1415681_at
3.443732241
1415682_at
3.176091259
1415683_at
3.81190998
1415684_at
3.308777774
1415685_at
3.208978517
1415686_at
3.668479103
1415687_a_at
4.340225921
1415688_at
3.814047721
1415689_s_at
3.780245284
Total number of rows:
45101
Table truncated, full table size
1024 Kbytes
.
Supplementary file
Size
Download
File type/resource
GSM139119.CEL.gz
6.3 Mb
(ftp)
(http)
CEL
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