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Sample GSM139548 Query DataSets for GSM139548
Status Public on Dec 19, 2008
Title HB11
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.60483752533577
117_3p_at 7.61428184536838
1494_3p_f_at 7.60039359163918
1552275_3p_s_at 7.8773091836549
1552281_3p_at 9.27599131121712
1552296_3p_at 5.94387500436991
1552302_3p_at 6.10201913744974
1552311_3p_a_at 8.34198454633057
1552321_3p_a_at 4.78501474108009
1552340_3p_at 6.56276802816485
1552343_3p_s_at 6.99844471494171
1552354_3p_at 7.25355149408085
1552476_3p_s_at 7.7066187725244
1552480_3p_s_at 3.72938659099123
1552504_3p_a_at 7.74700664553148
1552518_3p_s_at 5.6379729747656
1552528_3p_at 8.33987589755376
1552535_3p_at 8.02140535678336
1552566_3p_at 6.76296005094445
1552575_3p_a_at 7.39940664839363

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139548.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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