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Sample GSM139553 Query DataSets for GSM139553
Status Public on Dec 19, 2008
Title HB16
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.70023803203345
117_3p_at 7.62413411031342
1494_3p_f_at 7.52721543289979
1552275_3p_s_at 7.60958855680972
1552281_3p_at 9.15944179546836
1552296_3p_at 5.9449169518158
1552302_3p_at 6.16203704314999
1552311_3p_a_at 8.16002955435062
1552321_3p_a_at 4.39542823711755
1552340_3p_at 6.8049209100261
1552343_3p_s_at 6.90979606268081
1552354_3p_at 7.08809140909747
1552476_3p_s_at 7.35010354894555
1552480_3p_s_at 3.4493582327798
1552504_3p_a_at 7.42776807990794
1552518_3p_s_at 5.48630465669753
1552528_3p_at 8.34727223728096
1552535_3p_at 7.9607157734493
1552566_3p_at 7.10806662349372
1552575_3p_a_at 8.08085232673912

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139553.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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