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Sample GSM139555 Query DataSets for GSM139555
Status Public on Dec 19, 2008
Title HB18
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T3
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.75679225099636
117_3p_at 7.54144031977572
1494_3p_f_at 7.81149596855012
1552275_3p_s_at 7.79191017918861
1552281_3p_at 9.2558279414934
1552296_3p_at 5.84162989196657
1552302_3p_at 5.89511566285354
1552311_3p_a_at 8.29287123584553
1552321_3p_a_at 4.49231278146375
1552340_3p_at 6.58333996106022
1552343_3p_s_at 7.4260990902177
1552354_3p_at 6.84782533098884
1552476_3p_s_at 7.80350862188741
1552480_3p_s_at 3.33797819751689
1552504_3p_a_at 7.25873931720241
1552518_3p_s_at 5.48369846310869
1552528_3p_at 8.2142962138626
1552535_3p_at 7.97581337479573
1552566_3p_at 6.77042099118193
1552575_3p_a_at 8.55817140447946

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139555.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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