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GEO accession:
Sample GSM139566
Query DataSets for GSM139566
Status
Public on Dec 19, 2008
Title
HB29
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pn
Size: T2
Node: N1
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.02993783914469
117_3p_at
7.75279530908622
1494_3p_f_at
7.60895014913959
1552275_3p_s_at
7.71493173922578
1552281_3p_at
9.11477647974361
1552296_3p_at
5.84585301636307
1552302_3p_at
5.96549106586993
1552311_3p_a_at
8.50760530462435
1552321_3p_a_at
4.92636270233296
1552340_3p_at
6.82694909137212
1552343_3p_s_at
6.976994396402
1552354_3p_at
7.43246182050679
1552476_3p_s_at
7.52207641075926
1552480_3p_s_at
3.73286533897548
1552504_3p_a_at
7.87989761920641
1552518_3p_s_at
5.8753299557285
1552528_3p_at
8.41275682364902
1552535_3p_at
7.97841089388308
1552566_3p_at
6.63493123371577
1552575_3p_a_at
7.76469458816375
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139566.cel.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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