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Sample GSM139569 Query DataSets for GSM139569
Status Public on Dec 19, 2008
Title HB32
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pp
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.44930156295564
117_3p_at 7.70951167676481
1494_3p_f_at 7.53070481481006
1552275_3p_s_at 7.64399636704619
1552281_3p_at 9.00768769073616
1552296_3p_at 5.67498574502918
1552302_3p_at 6.70043252676687
1552311_3p_a_at 8.21562878785299
1552321_3p_a_at 4.82566586045718
1552340_3p_at 6.29991872006668
1552343_3p_s_at 6.75852733019579
1552354_3p_at 7.34700615739586
1552476_3p_s_at 7.81535295659876
1552480_3p_s_at 3.68030480596601
1552504_3p_a_at 7.5399123848457
1552518_3p_s_at 5.14479652121694
1552528_3p_at 8.21284996817847
1552535_3p_at 7.86476981735003
1552566_3p_at 6.41951943681998
1552575_3p_a_at 7.8202895641567

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139569.cel.gz 8.4 Mb (ftp)(http) CEL
Processed data included within Sample table

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