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Sample GSM139576 Query DataSets for GSM139576
Status Public on Dec 19, 2008
Title HB39
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pp
Size: T3
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.33069526913848
117_3p_at 7.50794210004533
1494_3p_f_at 7.30549930772882
1552275_3p_s_at 7.5942627939357
1552281_3p_at 9.41089575797768
1552296_3p_at 5.93841579185863
1552302_3p_at 5.86379298700051
1552311_3p_a_at 8.16304436866725
1552321_3p_a_at 5.00635471442453
1552340_3p_at 6.53177923784357
1552343_3p_s_at 6.93500822907936
1552354_3p_at 7.83883903000814
1552476_3p_s_at 8.04335395647822
1552480_3p_s_at 3.62353842881571
1552504_3p_a_at 7.81692307942897
1552518_3p_s_at 6.27421528097764
1552528_3p_at 8.05479906972168
1552535_3p_at 7.95695447528118
1552566_3p_at 6.57931135295839
1552575_3p_a_at 8.6668494437013

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139576.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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