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GEO accession:
Sample GSM139582
Query DataSets for GSM139582
Status
Public on Dec 19, 2008
Title
HB45
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
9.0932116201388
117_3p_at
7.835611349792
1494_3p_f_at
7.67733413375354
1552275_3p_s_at
7.5745226059178
1552281_3p_at
9.25380237690182
1552296_3p_at
5.73222404619815
1552302_3p_at
5.79017018991604
1552311_3p_a_at
8.18934522862217
1552321_3p_a_at
4.3986470198077
1552340_3p_at
7.1223230987982
1552343_3p_s_at
7.7758231345121
1552354_3p_at
6.95902522408684
1552476_3p_s_at
7.38476919392691
1552480_3p_s_at
4.04184771323786
1552504_3p_a_at
7.61710236312994
1552518_3p_s_at
5.55509895560267
1552528_3p_at
8.30810179808257
1552535_3p_at
7.73888406323026
1552566_3p_at
6.78818886469618
1552575_3p_a_at
8.20601861365555
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139582.cel.gz
8.4 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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