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Sample GSM139583 Query DataSets for GSM139583
Status Public on Dec 19, 2008
Title HB46
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.43318958587285
117_3p_at 7.816957875848
1494_3p_f_at 7.50884582134591
1552275_3p_s_at 7.9213646384392
1552281_3p_at 9.24849496404566
1552296_3p_at 5.80547187193892
1552302_3p_at 6.00105415904451
1552311_3p_a_at 8.36358930032057
1552321_3p_a_at 4.71197567668885
1552340_3p_at 6.79135945860174
1552343_3p_s_at 6.89830523161549
1552354_3p_at 6.97402251064289
1552476_3p_s_at 7.64438312606476
1552480_3p_s_at 3.54962013928219
1552504_3p_a_at 7.97520755550233
1552518_3p_s_at 6.28125166265472
1552528_3p_at 8.63235838257122
1552535_3p_at 7.8145265115371
1552566_3p_at 6.59852153185421
1552575_3p_a_at 7.65372245916857

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139583.cel.gz 8.5 Mb (ftp)(http) CEL
Processed data included within Sample table

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