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Sample GSM139586 Query DataSets for GSM139586
Status Public on Dec 19, 2008
Title HB49
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 9.08806244415297
117_3p_at 7.69602248028459
1494_3p_f_at 7.496522554192
1552275_3p_s_at 7.10891930250269
1552281_3p_at 9.22517238965663
1552296_3p_at 6.10381571460112
1552302_3p_at 6.08750659358587
1552311_3p_a_at 8.561676065628
1552321_3p_a_at 4.7720937297711
1552340_3p_at 6.8684471568869
1552343_3p_s_at 7.08269723243268
1552354_3p_at 7.67706925359402
1552476_3p_s_at 7.73482632658996
1552480_3p_s_at 3.65456629907078
1552504_3p_a_at 7.87500022206489
1552518_3p_s_at 5.82609756362972
1552528_3p_at 8.53520916308508
1552535_3p_at 7.94250255785254
1552566_3p_at 6.79623063957654
1552575_3p_a_at 7.84886963210061

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139586.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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