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GEO accession:
Sample GSM139595
Query DataSets for GSM139595
Status
Public on Dec 19, 2008
Title
HB58
Sample type
RNA
Source name
Human Breast Tumor
Organism
Homo sapiens
Characteristics
Label : pCR
Estrogen Receptor : En
Progesterone Receptor : Pn
Size: T2
Node: N0
Treatment protocol
none
Extracted molecule
total RNA
Extraction protocol
Qiagen RNeasy Mini Kit
Label
biotin
Label protocol
standard Affymetrix procedure
Hybridization protocol
Standard Affymetrix procedure
Scan protocol
Standard Affymetrix procedure
Description
Series of 102 tumours
Data processing
RMA
Submission date
Oct 11, 2006
Last update date
Jun 06, 2022
Contact name
Mauro Delorenzi
E-mail(s)
Mauro.Delorenzi@unil.ch
Organization name
Swiss Institute of Bioinformatics
Lab
BCF
Street address
Génopode Building, Quartier Sorge
City
Lausanne
ZIP/Postal code
1015
Country
Switzerland
Platform ID
GPL1352
Series (1)
GSE4779
A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by
GSE205568
Data table header descriptions
ID_REF
VALUE
RMA-calculated signal intensity
Data table
ID_REF
VALUE
1053_3p_at
8.80107633091394
117_3p_at
8.0434863487316
1494_3p_f_at
7.5072793036683
1552275_3p_s_at
8.04318285519741
1552281_3p_at
9.00601355319685
1552296_3p_at
5.86672361533858
1552302_3p_at
6.06080338585748
1552311_3p_a_at
8.24209697962678
1552321_3p_a_at
4.77536539057746
1552340_3p_at
6.63173778973929
1552343_3p_s_at
7.7125506757415
1552354_3p_at
7.78477987233416
1552476_3p_s_at
7.70043015002133
1552480_3p_s_at
4.03070841543695
1552504_3p_a_at
7.81920457024226
1552518_3p_s_at
5.75126198656658
1552528_3p_at
8.12908933837321
1552535_3p_at
7.84156775538818
1552566_3p_at
6.28303759318998
1552575_3p_a_at
7.7873457918161
Total number of rows:
61297
Table truncated, full table size
2186 Kbytes
.
Supplementary file
Size
Download
File type/resource
gsm139595.cel.gz
8.7 Mb
(ftp)
(http)
CEL
Processed data included within Sample table
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