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Sample GSM139599 Query DataSets for GSM139599
Status Public on Dec 19, 2008
Title HB62
Sample type RNA
 
Source name Human Breast Tumor
Organism Homo sapiens
Characteristics Label : npCR
Estrogen Receptor : Ep
Progesterone Receptor : Pp
Size: T2
Node: N1
Treatment protocol none
Extracted molecule total RNA
Extraction protocol Qiagen RNeasy Mini Kit
Label biotin
Label protocol standard Affymetrix procedure
 
Hybridization protocol Standard Affymetrix procedure
Scan protocol Standard Affymetrix procedure
Description Series of 102 tumours
Data processing RMA
 
Submission date Oct 11, 2006
Last update date Jun 06, 2022
Contact name Mauro Delorenzi
E-mail(s) Mauro.Delorenzi@unil.ch
Organization name Swiss Institute of Bioinformatics
Lab BCF
Street address GĂ©nopode Building, Quartier Sorge
City Lausanne
ZIP/Postal code 1015
Country Switzerland
 
Platform ID GPL1352
Series (1)
GSE4779 A stroma-related gene signature predicts sensitivity to epirubicin-containing neoadjuvant chemotherapy in breast cancer.
Relations
Reanalyzed by GSE205568

Data table header descriptions
ID_REF
VALUE RMA-calculated signal intensity

Data table
ID_REF VALUE
1053_3p_at 8.53554885348986
117_3p_at 7.67269222849128
1494_3p_f_at 8.02150845840328
1552275_3p_s_at 7.69384111372376
1552281_3p_at 9.35787984545372
1552296_3p_at 6.17610991415438
1552302_3p_at 5.78766888678741
1552311_3p_a_at 8.30674683284196
1552321_3p_a_at 4.96871727187729
1552340_3p_at 6.81145957504731
1552343_3p_s_at 6.9348926321577
1552354_3p_at 7.2986248694566
1552476_3p_s_at 7.70412904944084
1552480_3p_s_at 3.47642159944259
1552504_3p_a_at 7.645903774281
1552518_3p_s_at 5.45738297736475
1552528_3p_at 8.37437382324049
1552535_3p_at 8.02283502732478
1552566_3p_at 7.03471124986095
1552575_3p_a_at 8.08593366711166

Total number of rows: 61297

Table truncated, full table size 2186 Kbytes.




Supplementary file Size Download File type/resource
gsm139599.cel.gz 8.6 Mb (ftp)(http) CEL
Processed data included within Sample table

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